Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.43□□□□□ -0.1
CopaQ8CIE6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.43□□□□□ -0.1
CopaQ8CIE6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Gm13453-201ENSMUST00000118708 357 ntBASIC14.43□□□□□ -0.1
CopaQ8CIE6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.43□□□□□ -0.1
CopaQ8CIE6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.43□□□□□ -0.1
CopaQ8CIE6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CopaQ8CIE6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.42□□□□□ -0.1
CopaQ8CIE6 Gm12428-201ENSMUST00000119844 727 ntBASIC14.42□□□□□ -0.1
CopaQ8CIE6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Gm5479-201ENSMUST00000160578 435 ntBASIC14.42□□□□□ -0.1
CopaQ8CIE6 Gm25144-201ENSMUST00000179561 110 ntBASIC14.42□□□□□ -0.1
CopaQ8CIE6 Gm25352-201ENSMUST00000179815 110 ntBASIC14.42□□□□□ -0.1
CopaQ8CIE6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CopaQ8CIE6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CopaQ8CIE6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms