Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.25□□□□□ -0.13
Clip4Q8CI96 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.25□□□□□ -0.13
Clip4Q8CI96 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.25□□□□□ -0.13
Clip4Q8CI96 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Mir449b-201ENSMUST00000104833 80 ntBASIC14.24□□□□□ -0.13
Clip4Q8CI96 Gm15920-201ENSMUST00000118998 402 ntBASIC14.24□□□□□ -0.13
Clip4Q8CI96 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Clip4Q8CI96 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Gm25925-201ENSMUST00000158314 306 ntBASIC14.24□□□□□ -0.13
Clip4Q8CI96 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.24□□□□□ -0.13
Clip4Q8CI96 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clip4Q8CI96 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Gm13616-201ENSMUST00000120600 222 ntBASIC14.23□□□□□ -0.13
Clip4Q8CI96 Gm24158-201ENSMUST00000175263 71 ntBASIC14.23□□□□□ -0.13
Clip4Q8CI96 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.23□□□□□ -0.13
Clip4Q8CI96 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.23□□□□□ -0.13
Clip4Q8CI96 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.23□□□□□ -0.13
Clip4Q8CI96 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.23□□□□□ -0.13
Clip4Q8CI96 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clip4Q8CI96 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms