Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Gm42612-201ENSMUST00000197986 623 ntBASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Gm43170-201ENSMUST00000199827 612 ntBASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Gm9794-201ENSMUST00000202370 423 ntBASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rbm28Q8CGC6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Gm33320-201ENSMUST00000192232 530 ntBASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rbm28Q8CGC6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Rbm28Q8CGC6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rbm28Q8CGC6 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.64■□□□□ 0.26
Rbm28Q8CGC6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Gm21854-201ENSMUST00000179901 471 ntBASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Gm7653-201ENSMUST00000214567 508 ntBASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rbm28Q8CGC6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms