Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc2Q8CG48 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Gm15957-201ENSMUST00000118893 974 ntBASIC16.17■□□□□ 0.18
Smc2Q8CG48 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.17■□□□□ 0.18
Smc2Q8CG48 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Gm9824-201ENSMUST00000178707 561 ntBASIC16.17■□□□□ 0.18
Smc2Q8CG48 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.17■□□□□ 0.18
Smc2Q8CG48 AA619741-201ENSMUST00000195095 646 ntBASIC16.17■□□□□ 0.18
Smc2Q8CG48 Gm44608-201ENSMUST00000206827 855 ntBASIC16.17■□□□□ 0.18
Smc2Q8CG48 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smc2Q8CG48 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.17■□□□□ 0.18
Smc2Q8CG48 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.17■□□□□ 0.18
Smc2Q8CG48 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc2Q8CG48 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.16■□□□□ 0.18
Smc2Q8CG48 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Mir6990-201ENSMUST00000183724 91 ntBASIC16.16■□□□□ 0.18
Smc2Q8CG48 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Smc2Q8CG48 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Gm6222-201ENSMUST00000120787 396 ntBASIC16.15■□□□□ 0.18
Smc2Q8CG48 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Gm24513-201ENSMUST00000174964 138 ntBASIC16.15■□□□□ 0.18
Smc2Q8CG48 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Gm2213-201ENSMUST00000197485 688 ntBASIC16.15■□□□□ 0.18
Smc2Q8CG48 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.15■□□□□ 0.18
Smc2Q8CG48 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.15■□□□□ 0.18
Smc2Q8CG48 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.15■□□□□ 0.18
Smc2Q8CG48 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.15■□□□□ 0.18
Smc2Q8CG48 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc2Q8CG48 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms