Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Gm12428-201ENSMUST00000119844 727 ntBASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Mir6977-201ENSMUST00000184960 64 ntBASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Gm18049-201ENSMUST00000208909 581 ntBASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup88Q8CEC0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.66■□□□□ 0.26
Nup88Q8CEC0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Gm25144-201ENSMUST00000179561 110 ntBASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Gm25352-201ENSMUST00000179815 110 ntBASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Gm27437-201ENSMUST00000183429 107 ntBASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Gm2451-201ENSMUST00000199447 999 ntBASIC16.66■□□□□ 0.26
Nup88Q8CEC0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Gm10290-201ENSMUST00000200451 999 ntBASIC16.66■□□□□ 0.26
Nup88Q8CEC0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Nup88Q8CEC0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Gm13453-201ENSMUST00000118708 357 ntBASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.65■□□□□ 0.26
Nup88Q8CEC0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Nup88Q8CEC0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nup88Q8CEC0 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.64■□□□□ 0.26
Nup88Q8CEC0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nup88Q8CEC0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup88Q8CEC0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms