Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Gm23935-201ENSMUST00000102303 57 ntBASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Gm24270-201ENSMUST00000102326 57 ntBASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Gm24245-201ENSMUST00000157318 57 ntBASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Gm16198-201ENSMUST00000118766 670 ntBASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Gm10154-201ENSMUST00000084445 354 ntBASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc87Q8CDL9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Gm45098-201ENSMUST00000207179 657 ntBASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc87Q8CDL9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms