Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vcpip1Q8CDG3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Gm2810-201ENSMUST00000118681 990 ntBASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcpip1Q8CDG3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcpip1Q8CDG3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Gm27321-201ENSMUST00000185021 205 ntBASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcpip1Q8CDG3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vcpip1Q8CDG3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms