Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lrif1Q8CDD9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Lrif1Q8CDD9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Lrif1Q8CDD9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lrif1Q8CDD9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.98□□□□□ -0.17
Lrif1Q8CDD9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Lrif1Q8CDD9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lrif1Q8CDD9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Olfr286-202ENSMUST00000205305 969 ntBASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lrif1Q8CDD9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lrif1Q8CDD9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lrif1Q8CDD9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lrif1Q8CDD9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lrif1Q8CDD9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Lrif1Q8CDD9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lrif1Q8CDD9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lrif1Q8CDD9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Lrif1Q8CDD9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Gm2451-201ENSMUST00000199447 999 ntBASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Gm10290-201ENSMUST00000200451 999 ntBASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms