Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Mir6977-201ENSMUST00000184960 64 ntBASIC13.68□□□□□ -0.22
SynpoQ8CC35 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.68□□□□□ -0.22
SynpoQ8CC35 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynpoQ8CC35 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.67□□□□□ -0.22
SynpoQ8CC35 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Gm13453-201ENSMUST00000118708 357 ntBASIC13.67□□□□□ -0.22
SynpoQ8CC35 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Gm25144-201ENSMUST00000179561 110 ntBASIC13.67□□□□□ -0.22
SynpoQ8CC35 Gm25352-201ENSMUST00000179815 110 ntBASIC13.67□□□□□ -0.22
SynpoQ8CC35 Gm27618-201ENSMUST00000183671 60 ntBASIC13.67□□□□□ -0.22
SynpoQ8CC35 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynpoQ8CC35 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.66□□□□□ -0.22
SynpoQ8CC35 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.66□□□□□ -0.22
SynpoQ8CC35 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SynpoQ8CC35 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SynpoQ8CC35 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms