Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.56■□□□□ 0.08
Trim9Q8C7M3 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim9Q8C7M3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Gm25144-201ENSMUST00000179561 110 ntBASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Gm25352-201ENSMUST00000179815 110 ntBASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.55■□□□□ 0.08
Trim9Q8C7M3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Gm18027-201ENSMUST00000218947 619 ntBASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim9Q8C7M3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Gm15653-201ENSMUST00000119247 907 ntBASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Gm37714-201ENSMUST00000194742 342 ntBASIC15.54■□□□□ 0.08
Trim9Q8C7M3 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim9Q8C7M3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms