Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Gm45930-201ENSMUST00000221330 292 ntBASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Snora73a-201ENSMUST00000082453 205 ntBASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Gm22331-201ENSMUST00000158066 136 ntBASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Gm12384-201ENSMUST00000119228 919 ntBASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col6a6Q8C6K9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Gm6152-201ENSMUST00000151704 340 ntBASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Gm29649-201ENSMUST00000185649 419 ntBASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Gm3961-201ENSMUST00000204425 994 ntBASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col6a6Q8C6K9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms