Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Gm15460-201ENSMUST00000118147 391 ntBASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Auts2-212ENSMUST00000178555 309 ntBASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc60Q8C4J0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Gm20949-201ENSMUST00000206478 952 ntBASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc60Q8C4J0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Gm3436-201ENSMUST00000179930 840 ntBASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Mir7023-201ENSMUST00000185093 64 ntBASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Gm37714-201ENSMUST00000194742 342 ntBASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Gm18027-201ENSMUST00000218947 619 ntBASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc60Q8C4J0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms