Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cps1Q8C196 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cps1Q8C196 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cps1Q8C196 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Cps1Q8C196 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cps1Q8C196 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cps1Q8C196 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC18.63■□□□□ 0.57
Cps1Q8C196 AC134254.1-201ENSMUST00000221362 167 ntBASIC18.63■□□□□ 0.57
Cps1Q8C196 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cps1Q8C196 Gm16372-201ENSMUST00000073088 450 ntBASIC18.63■□□□□ 0.57
Cps1Q8C196 Gm3695-201ENSMUST00000087222 1009 ntBASIC18.63■□□□□ 0.57
Cps1Q8C196 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cps1Q8C196 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cps1Q8C196 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cps1Q8C196 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cps1Q8C196 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC18.62■□□□□ 0.57
Cps1Q8C196 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Gm7993-201ENSMUST00000200970 1384 ntBASIC18.62■□□□□ 0.57
Cps1Q8C196 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Gm11591-201ENSMUST00000120063 702 ntBASIC18.62■□□□□ 0.57
Cps1Q8C196 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Gm7809-201ENSMUST00000153199 742 ntBASIC18.62■□□□□ 0.57
Cps1Q8C196 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Cps1Q8C196 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cps1Q8C196 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Gm8227-201ENSMUST00000223306 571 ntBASIC18.62■□□□□ 0.57
Cps1Q8C196 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cps1Q8C196 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cps1Q8C196 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Cps1Q8C196 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 Gm18244-201ENSMUST00000219747 1566 ntBASIC18.61■□□□□ 0.57
Cps1Q8C196 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Cps1Q8C196 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC18.61■□□□□ 0.57
Cps1Q8C196 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cps1Q8C196 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Cps1Q8C196 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cps1Q8C196 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.61■□□□□ 0.57
Cps1Q8C196 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cps1Q8C196 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cps1Q8C196 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.6■□□□□ 0.57
Cps1Q8C196 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cps1Q8C196 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cps1Q8C196 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC18.6■□□□□ 0.57
Cps1Q8C196 Gm16202-201ENSMUST00000117532 544 ntBASIC18.6■□□□□ 0.57
Cps1Q8C196 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC18.6■□□□□ 0.57
Cps1Q8C196 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC18.6■□□□□ 0.57
Cps1Q8C196 Gm44069-201ENSMUST00000204898 506 ntBASIC18.6■□□□□ 0.57
Cps1Q8C196 AC132384.14-201ENSMUST00000219346 1147 ntBASIC18.6■□□□□ 0.57
Cps1Q8C196 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cps1Q8C196 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cps1Q8C196 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.6■□□□□ 0.57
Cps1Q8C196 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.6■□□□□ 0.57
Cps1Q8C196 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cps1Q8C196 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cps1Q8C196 Gm8793-201ENSMUST00000183069 1303 ntBASIC18.6■□□□□ 0.57
Cps1Q8C196 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cps1Q8C196 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cps1Q8C196 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cps1Q8C196 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cps1Q8C196 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cps1Q8C196 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cps1Q8C196 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cps1Q8C196 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC18.6■□□□□ 0.57
Cps1Q8C196 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cps1Q8C196 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Gm5637-201ENSMUST00000153890 1119 ntBASIC18.59■□□□□ 0.57
Cps1Q8C196 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC18.59■□□□□ 0.57
Cps1Q8C196 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Mir7070-201ENSMUST00000183657 86 ntBASIC18.59■□□□□ 0.57
Cps1Q8C196 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Cps1Q8C196 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.59■□□□□ 0.57
Cps1Q8C196 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cps1Q8C196 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms