Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Gm45453-201ENSMUST00000211758 853 ntBASIC13.21□□□□□ -0.29
Cpne1Q8C166 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.21□□□□□ -0.29
Cpne1Q8C166 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cpne1Q8C166 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpne1Q8C166 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpne1Q8C166 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpne1Q8C166 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpne1Q8C166 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Cpne1Q8C166 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.21□□□□□ -0.3
Cpne1Q8C166 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.21□□□□□ -0.3
Cpne1Q8C166 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Cpne1Q8C166 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpne1Q8C166 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cpne1Q8C166 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.2□□□□□ -0.3
Cpne1Q8C166 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Gm12882-201ENSMUST00000121696 517 ntBASIC13.2□□□□□ -0.3
Cpne1Q8C166 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Gm27622-201ENSMUST00000183779 60 ntBASIC13.2□□□□□ -0.3
Cpne1Q8C166 Gm38294-201ENSMUST00000192831 381 ntBASIC13.2□□□□□ -0.3
Cpne1Q8C166 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.2□□□□□ -0.3
Cpne1Q8C166 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.2□□□□□ -0.3
Cpne1Q8C166 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.2□□□□□ -0.3
Cpne1Q8C166 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne1Q8C166 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Gm24543-201ENSMUST00000103867 82 ntBASIC13.19□□□□□ -0.3
Cpne1Q8C166 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Mir6956-201ENSMUST00000183598 62 ntBASIC13.19□□□□□ -0.3
Cpne1Q8C166 Gm27618-201ENSMUST00000183671 60 ntBASIC13.19□□□□□ -0.3
Cpne1Q8C166 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne1Q8C166 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne1Q8C166 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne1Q8C166 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms