Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Mir449b-201ENSMUST00000104833 80 ntBASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Gm14701-201ENSMUST00000117156 348 ntBASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Gm8396-201ENSMUST00000057361 823 ntBASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf3Q8C120 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Gm12882-201ENSMUST00000121696 517 ntBASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf3Q8C120 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Sh3rf3Q8C120 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sh3rf3Q8C120 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sh3rf3Q8C120 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Sh3rf3Q8C120 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sh3rf3Q8C120 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sh3rf3Q8C120 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Gm25948-201ENSMUST00000175334 112 ntBASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Gm10253-201ENSMUST00000194270 940 ntBASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 BC001981-202ENSMUST00000191393 1545 ntBASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sh3rf3Q8C120 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf3Q8C120 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms