Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.62■□□□□ 0.09
Trim47Q8C0E3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Gm11434-201ENSMUST00000122379 629 ntBASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.62■□□□□ 0.09
Trim47Q8C0E3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Gm9797-201ENSMUST00000052902 613 ntBASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trim47Q8C0E3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trim47Q8C0E3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim47Q8C0E3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim47Q8C0E3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim47Q8C0E3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms