Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Gm24543-201ENSMUST00000103867 82 ntBASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.56□□□□□ -0.08
Trub1Q8C0D0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Gm14701-201ENSMUST00000117156 348 ntBASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trub1Q8C0D0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Gm8410-201ENSMUST00000117225 605 ntBASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Gm25948-201ENSMUST00000175334 112 ntBASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Gm27622-201ENSMUST00000183779 60 ntBASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Gm6916-202ENSMUST00000205523 195 ntBASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trub1Q8C0D0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trub1Q8C0D0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms