Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.27
Cdk5rap1Q8BTW8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdk5rap1Q8BTW8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdk5rap1Q8BTW8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdk5rap1Q8BTW8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdk5rap1Q8BTW8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm18027-201ENSMUST00000218947 619 ntBASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap1Q8BTW8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm11424-201ENSMUST00000121929 829 ntBASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap1Q8BTW8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms