Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4Q8BQZ5 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Acot6-202ENSMUST00000222921 3622 ntBASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Gm25287-201ENSMUST00000103846 110 ntBASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Gm22918-201ENSMUST00000103855 110 ntBASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Gm5779-201ENSMUST00000218467 910 ntBASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4Q8BQZ5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.71□□□□□ -0.22
Cpsf4Q8BQZ5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4Q8BQZ5 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cpsf4Q8BQZ5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4Q8BQZ5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.71□□□□□ -0.22
Cpsf4Q8BQZ5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Cpsf4Q8BQZ5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4Q8BQZ5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4Q8BQZ5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4Q8BQZ5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4Q8BQZ5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Gm38225-201ENSMUST00000194001 393 ntBASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4Q8BQZ5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms