Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Gm10275-202ENSMUST00000168697 495 ntBASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Psmb5-202ENSMUST00000227257 622 ntBASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Gm10275-201ENSMUST00000092620 635 ntBASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp2bQ8BJF9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.46□□□□□ -0.1
Chmp2bQ8BJF9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp2bQ8BJF9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp2bQ8BJF9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp2bQ8BJF9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp2bQ8BJF9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp2bQ8BJF9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Gm44492-201ENSMUST00000197012 141 ntBASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Mzt1-203ENSMUST00000227948 952 ntBASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chmp2bQ8BJF9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Gm18733-201ENSMUST00000173950 856 ntBASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2bQ8BJF9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2bQ8BJF9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms