Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm18057-201ENSMUST00000208220 503 ntBASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc40Q8BI79 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc40Q8BI79 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc40Q8BI79 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms