Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.59□□□□□ -0.07
Trim62Q80V85 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.59□□□□□ -0.07
Trim62Q80V85 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Trim62Q80V85 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim62Q80V85 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Trim62Q80V85 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim62Q80V85 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim62Q80V85 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim62Q80V85 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.58□□□□□ -0.08
Trim62Q80V85 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.58□□□□□ -0.08
Trim62Q80V85 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trim62Q80V85 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim62Q80V85 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.58□□□□□ -0.08
Trim62Q80V85 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.58□□□□□ -0.08
Trim62Q80V85 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trim62Q80V85 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim62Q80V85 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.58□□□□□ -0.08
Trim62Q80V85 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.58□□□□□ -0.08
Trim62Q80V85 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim62Q80V85 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trim62Q80V85 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim62Q80V85 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.58□□□□□ -0.08
Trim62Q80V85 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trim62Q80V85 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim62Q80V85 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim62Q80V85 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim62Q80V85 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim62Q80V85 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim62Q80V85 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trim62Q80V85 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim62Q80V85 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Trim62Q80V85 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim62Q80V85 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.57□□□□□ -0.08
Trim62Q80V85 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Trim62Q80V85 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Trim62Q80V85 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim62Q80V85 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim62Q80V85 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim62Q80V85 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.57□□□□□ -0.08
Trim62Q80V85 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.57□□□□□ -0.08
Trim62Q80V85 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.57□□□□□ -0.08
Trim62Q80V85 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Trim62Q80V85 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim62Q80V85 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
Trim62Q80V85 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim62Q80V85 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim62Q80V85 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim62Q80V85 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim62Q80V85 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim62Q80V85 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim62Q80V85 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim62Q80V85 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim62Q80V85 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim62Q80V85 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim62Q80V85 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim62Q80V85 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim62Q80V85 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms