Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Gm3436-201ENSMUST00000179930 840 ntBASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Gm9522-201ENSMUST00000182394 926 ntBASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb4Q6P8W9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Mir125a-201ENSMUST00000083545 68 ntBASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgb4Q6P8W9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgb4Q6P8W9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Gm12490-201ENSMUST00000120255 560 ntBASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Hmgb4Q6P8W9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms