Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Gm9824-201ENSMUST00000178707 561 ntBASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sp140Q6NSQ5 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Gm27631-201ENSMUST00000184163 466 ntBASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Chchd1-203ENSMUST00000224633 557 ntBASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sp140Q6NSQ5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Gm45453-201ENSMUST00000211758 853 ntBASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms