Protein–RNA interactions for Protein: Q6A0D4

Rftn1, Raftlin, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn1Q6A0D4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rftn1Q6A0D4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rftn1Q6A0D4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.33□□□□□ -0.11
Rftn1Q6A0D4 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.33□□□□□ -0.11
Rftn1Q6A0D4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rftn1Q6A0D4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rftn1Q6A0D4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rftn1Q6A0D4 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.33□□□□□ -0.11
Rftn1Q6A0D4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rftn1Q6A0D4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Gm12928-201ENSMUST00000117115 573 ntBASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Gm43094-201ENSMUST00000196549 921 ntBASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Gm18027-201ENSMUST00000218947 619 ntBASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Gm10478-201ENSMUST00000084451 396 ntBASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.33□□□□□ -0.12
Rftn1Q6A0D4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Gm14660-201ENSMUST00000119809 575 ntBASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Gm37424-201ENSMUST00000191727 561 ntBASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Gm42693-201ENSMUST00000196779 631 ntBASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rftn1Q6A0D4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Rftn1Q6A0D4 Gm12134-201ENSMUST00000122109 520 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms