Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Notch3Q61982 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Notch3Q61982 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Notch3Q61982 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Notch3Q61982 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.87□□□□□ -0.67
Notch3Q61982 Gm11918-201ENSMUST00000121660 179 ntBASIC10.87□□□□□ -0.67
Notch3Q61982 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.87□□□□□ -0.67
Notch3Q61982 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Notch3Q61982 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Notch3Q61982 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.87□□□□□ -0.67
Notch3Q61982 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.87□□□□□ -0.67
Notch3Q61982 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Gm20445-201ENSMUST00000061905 565 ntBASIC10.87□□□□□ -0.67
Notch3Q61982 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.87□□□□□ -0.67
Notch3Q61982 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Notch3Q61982 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Notch3Q61982 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.87□□□□□ -0.67
Notch3Q61982 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.87□□□□□ -0.67
Notch3Q61982 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.87□□□□□ -0.67
Notch3Q61982 Gm3436-201ENSMUST00000179930 840 ntBASIC10.87□□□□□ -0.67
Notch3Q61982 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.87□□□□□ -0.67
Notch3Q61982 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Notch3Q61982 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Notch3Q61982 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Notch3Q61982 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.86□□□□□ -0.67
Notch3Q61982 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Notch3Q61982 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.86□□□□□ -0.67
Notch3Q61982 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.86□□□□□ -0.67
Notch3Q61982 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Notch3Q61982 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.86□□□□□ -0.67
Notch3Q61982 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.86□□□□□ -0.67
Notch3Q61982 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.86□□□□□ -0.67
Notch3Q61982 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Notch3Q61982 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.86□□□□□ -0.67
Notch3Q61982 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Notch3Q61982 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms