Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Six4Q61321 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Six4Q61321 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six4Q61321 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.22□□□□□ -0.13
Six4Q61321 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Six4Q61321 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.22□□□□□ -0.13
Six4Q61321 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.22□□□□□ -0.13
Six4Q61321 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.22□□□□□ -0.13
Six4Q61321 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Six4Q61321 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.22□□□□□ -0.13
Six4Q61321 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Six4Q61321 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Six4Q61321 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six4Q61321 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.22□□□□□ -0.13
Six4Q61321 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Six4Q61321 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.21□□□□□ -0.13
Six4Q61321 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Six4Q61321 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Six4Q61321 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Six4Q61321 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.21□□□□□ -0.13
Six4Q61321 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.21□□□□□ -0.13
Six4Q61321 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.21□□□□□ -0.13
Six4Q61321 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.21□□□□□ -0.13
Six4Q61321 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Six4Q61321 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.21□□□□□ -0.13
Six4Q61321 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.21□□□□□ -0.13
Six4Q61321 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Six4Q61321 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.21□□□□□ -0.13
Six4Q61321 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.21□□□□□ -0.13
Six4Q61321 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Six4Q61321 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six4Q61321 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Six4Q61321 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Six4Q61321 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Six4Q61321 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.2□□□□□ -0.14
Six4Q61321 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Six4Q61321 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Six4Q61321 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Six4Q61321 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Gm21470-201ENSMUST00000187680 696 ntBASIC14.2□□□□□ -0.14
Six4Q61321 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.2□□□□□ -0.14
Six4Q61321 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.2□□□□□ -0.14
Six4Q61321 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Six4Q61321 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six4Q61321 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms