Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.43□□□□□ -0.1
Slc6a4Q60857 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Slc6a4Q60857 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.42□□□□□ -0.1
Slc6a4Q60857 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Gm37917-201ENSMUST00000194711 392 ntBASIC14.42□□□□□ -0.1
Slc6a4Q60857 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.42□□□□□ -0.1
Slc6a4Q60857 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.42□□□□□ -0.1
Slc6a4Q60857 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Slc6a4Q60857 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Gm23984-201ENSMUST00000157139 203 ntBASIC14.41□□□□□ -0.1
Slc6a4Q60857 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.41□□□□□ -0.1
Slc6a4Q60857 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Gm17795-201ENSMUST00000214505 757 ntBASIC14.41□□□□□ -0.1
Slc6a4Q60857 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Gm6180-201ENSMUST00000065243 498 ntBASIC14.41□□□□□ -0.1
Slc6a4Q60857 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.41□□□□□ -0.1
Slc6a4Q60857 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a4Q60857 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Slc6a4Q60857 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms