Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ripk1Q60855 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Ripk1Q60855 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Ripk1Q60855 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.32□□□□□ -0.28
Ripk1Q60855 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.32□□□□□ -0.28
Ripk1Q60855 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ripk1Q60855 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.32□□□□□ -0.28
Ripk1Q60855 Gm12882-201ENSMUST00000121696 517 ntBASIC13.32□□□□□ -0.28
Ripk1Q60855 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.32□□□□□ -0.28
Ripk1Q60855 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.32□□□□□ -0.28
Ripk1Q60855 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.32□□□□□ -0.28
Ripk1Q60855 Gm18049-201ENSMUST00000208909 581 ntBASIC13.32□□□□□ -0.28
Ripk1Q60855 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ripk1Q60855 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.32□□□□□ -0.28
Ripk1Q60855 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.32□□□□□ -0.28
Ripk1Q60855 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ripk1Q60855 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ripk1Q60855 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.31□□□□□ -0.28
Ripk1Q60855 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ripk1Q60855 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.31□□□□□ -0.28
Ripk1Q60855 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.31□□□□□ -0.28
Ripk1Q60855 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.31□□□□□ -0.28
Ripk1Q60855 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.31□□□□□ -0.28
Ripk1Q60855 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Gm9824-201ENSMUST00000178707 561 ntBASIC13.31□□□□□ -0.28
Ripk1Q60855 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Gm44335-201ENSMUST00000196879 141 ntBASIC13.31□□□□□ -0.28
Ripk1Q60855 Gm44297-201ENSMUST00000198304 141 ntBASIC13.31□□□□□ -0.28
Ripk1Q60855 Gm44346-201ENSMUST00000198851 141 ntBASIC13.31□□□□□ -0.28
Ripk1Q60855 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.31□□□□□ -0.28
Ripk1Q60855 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ripk1Q60855 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ripk1Q60855 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ripk1Q60855 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.31□□□□□ -0.28
Ripk1Q60855 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ripk1Q60855 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ripk1Q60855 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ripk1Q60855 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ripk1Q60855 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.3□□□□□ -0.28
Ripk1Q60855 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.3□□□□□ -0.28
Ripk1Q60855 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ripk1Q60855 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.3□□□□□ -0.28
Ripk1Q60855 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ripk1Q60855 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ripk1Q60855 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ripk1Q60855 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ripk1Q60855 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ripk1Q60855 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms