Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Shroom1Q5SX79 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Shroom1Q5SX79 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shroom1Q5SX79 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Shroom1Q5SX79 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shroom1Q5SX79 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shroom1Q5SX79 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shroom1Q5SX79 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shroom1Q5SX79 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.01□□□□□ -0.01
Shroom1Q5SX79 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Gm28760-201ENSMUST00000185995 736 ntBASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Gm6745-201ENSMUST00000199216 526 ntBASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shroom1Q5SX79 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15□□□□□ -0.01
Shroom1Q5SX79 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15□□□□□ -0.01
Shroom1Q5SX79 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15□□□□□ -0.01
Shroom1Q5SX79 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Gm44981-201ENSMUST00000205549 1943 ntBASIC15□□□□□ -0.01
Shroom1Q5SX79 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Shroom1Q5SX79 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15□□□□□ -0.01
Shroom1Q5SX79 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15□□□□□ -0.01
Shroom1Q5SX79 Gm15393-201ENSMUST00000120499 219 ntBASIC15□□□□□ -0.01
Shroom1Q5SX79 Gm31326-201ENSMUST00000191856 1048 ntBASIC15□□□□□ -0.01
Shroom1Q5SX79 Gm10766-202ENSMUST00000194123 606 ntBASIC15□□□□□ -0.01
Shroom1Q5SX79 Gm37917-201ENSMUST00000194711 392 ntBASIC15□□□□□ -0.01
Shroom1Q5SX79 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15□□□□□ -0.01
Shroom1Q5SX79 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15□□□□□ -0.01
Shroom1Q5SX79 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15□□□□□ -0.01
Shroom1Q5SX79 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15□□□□□ -0.01
Shroom1Q5SX79 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Shroom1Q5SX79 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15□□□□□ -0.01
Shroom1Q5SX79 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15□□□□□ -0.01
Shroom1Q5SX79 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Shroom1Q5SX79 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shroom1Q5SX79 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Gm15460-201ENSMUST00000118147 391 ntBASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Gm12882-201ENSMUST00000121696 517 ntBASIC14.99□□□□□ -0.01
Shroom1Q5SX79 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Gm23984-201ENSMUST00000157139 203 ntBASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.99□□□□□ -0.01
Shroom1Q5SX79 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms