Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Gm17808-201ENSMUST00000200859 894 ntBASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Trav3-3Q5R1C3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 AA414768-201ENSMUST00000121924 1257 ntBASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Gm29518-201ENSMUST00000190858 372 ntBASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-3Q5R1C3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Gm8344-201ENSMUST00000119813 856 ntBASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Mir3081-201ENSMUST00000175305 84 ntBASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Gm8349-201ENSMUST00000182720 1003 ntBASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-3Q5R1C3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms