Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Bdp1Q571C7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Bdp1Q571C7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Bdp1Q571C7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.21□□□□□ -0.13
Bdp1Q571C7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.21□□□□□ -0.13
Bdp1Q571C7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Bdp1Q571C7 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.21□□□□□ -0.13
Bdp1Q571C7 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Bdp1Q571C7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Bdp1Q571C7 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.21□□□□□ -0.13
Bdp1Q571C7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.21□□□□□ -0.13
Bdp1Q571C7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Bdp1Q571C7 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Bdp1Q571C7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.21□□□□□ -0.14
Bdp1Q571C7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Bdp1Q571C7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Gm24548-201ENSMUST00000158650 108 ntBASIC14.2□□□□□ -0.14
Bdp1Q571C7 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.2□□□□□ -0.14
Bdp1Q571C7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.2□□□□□ -0.14
Bdp1Q571C7 Gm13385-201ENSMUST00000121089 220 ntBASIC14.2□□□□□ -0.14
Bdp1Q571C7 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Bdp1Q571C7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Gm8927-201ENSMUST00000181978 981 ntBASIC14.2□□□□□ -0.14
Bdp1Q571C7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.2□□□□□ -0.14
Bdp1Q571C7 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Gm45770-201ENSMUST00000212105 616 ntBASIC14.2□□□□□ -0.14
Bdp1Q571C7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Bdp1Q571C7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Gm23200-201ENSMUST00000104379 132 ntBASIC14.19□□□□□ -0.14
Bdp1Q571C7 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Bdp1Q571C7 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Gm28450-201ENSMUST00000187349 638 ntBASIC14.19□□□□□ -0.14
Bdp1Q571C7 Gm44551-201ENSMUST00000208804 171 ntBASIC14.19□□□□□ -0.14
Bdp1Q571C7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.19□□□□□ -0.14
Bdp1Q571C7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.19□□□□□ -0.14
Bdp1Q571C7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.19□□□□□ -0.14
Bdp1Q571C7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Gm13047-201ENSMUST00000117116 815 ntBASIC14.19□□□□□ -0.14
Bdp1Q571C7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.19□□□□□ -0.14
Bdp1Q571C7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.19□□□□□ -0.14
Bdp1Q571C7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bdp1Q571C7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Bdp1Q571C7 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.18□□□□□ -0.14
Bdp1Q571C7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bdp1Q571C7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bdp1Q571C7 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.18□□□□□ -0.14
Bdp1Q571C7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bdp1Q571C7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.18□□□□□ -0.14
Bdp1Q571C7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Bdp1Q571C7 Gm14726-201ENSMUST00000120623 896 ntBASIC14.18□□□□□ -0.14
Bdp1Q571C7 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Bdp1Q571C7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms