Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Gm26308-201ENSMUST00000157768 69 ntBASIC13.95□□□□□ -0.18
Scn2bQ56A07 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Gm45612-201ENSMUST00000211320 160 ntBASIC13.95□□□□□ -0.18
Scn2bQ56A07 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.94□□□□□ -0.18
Scn2bQ56A07 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.94□□□□□ -0.18
Scn2bQ56A07 Gm11543-201ENSMUST00000120758 370 ntBASIC13.94□□□□□ -0.18
Scn2bQ56A07 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.94□□□□□ -0.18
Scn2bQ56A07 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn2bQ56A07 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Scn2bQ56A07 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.93□□□□□ -0.18
Scn2bQ56A07 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Gm23935-201ENSMUST00000102303 57 ntBASIC13.93□□□□□ -0.18
Scn2bQ56A07 Gm24270-201ENSMUST00000102326 57 ntBASIC13.93□□□□□ -0.18
Scn2bQ56A07 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Gm24245-201ENSMUST00000157318 57 ntBASIC13.93□□□□□ -0.18
Scn2bQ56A07 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.93□□□□□ -0.18
Scn2bQ56A07 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.93□□□□□ -0.18
Scn2bQ56A07 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn2bQ56A07 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms