Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Gm5354-201ENSMUST00000182417 973 ntBASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rc3h1Q4VGL6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rc3h1Q4VGL6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rc3h1Q4VGL6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rc3h1Q4VGL6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rc3h1Q4VGL6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.27■□□□□ 0.19
Rc3h1Q4VGL6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rc3h1Q4VGL6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rc3h1Q4VGL6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rc3h1Q4VGL6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rc3h1Q4VGL6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rc3h1Q4VGL6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rc3h1Q4VGL6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Gm15678-201ENSMUST00000117573 960 ntBASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Gm12341-201ENSMUST00000119724 503 ntBASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Gm8927-201ENSMUST00000181978 981 ntBASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Gm45384-201ENSMUST00000210451 277 ntBASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Gm3222-201ENSMUST00000071282 990 ntBASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rc3h1Q4VGL6 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms