Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.36■□□□□ 0.21
Cdkl5Q3UTQ8 Gm16476-201ENSMUST00000221544 139 ntBASIC16.36■□□□□ 0.21
Cdkl5Q3UTQ8 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.36■□□□□ 0.21
Cdkl5Q3UTQ8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl5Q3UTQ8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl5Q3UTQ8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl5Q3UTQ8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cdkl5Q3UTQ8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl5Q3UTQ8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl5Q3UTQ8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkl5Q3UTQ8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cdkl5Q3UTQ8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.36■□□□□ 0.21
Cdkl5Q3UTQ8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Gm27430-201ENSMUST00000184585 107 ntBASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Gm28630-201ENSMUST00000187806 498 ntBASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Gm44333-201ENSMUST00000197168 107 ntBASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkl5Q3UTQ8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cdkl5Q3UTQ8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkl5Q3UTQ8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkl5Q3UTQ8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkl5Q3UTQ8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkl5Q3UTQ8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkl5Q3UTQ8 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.33■□□□□ 0.21
Cdkl5Q3UTQ8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkl5Q3UTQ8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkl5Q3UTQ8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkl5Q3UTQ8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkl5Q3UTQ8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkl5Q3UTQ8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Gm25144-201ENSMUST00000179561 110 ntBASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Gm25352-201ENSMUST00000179815 110 ntBASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms