Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.74■□□□□ 0.27
Spg7Q3ULF4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Spg7Q3ULF4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Spg7Q3ULF4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg7Q3ULF4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg7Q3ULF4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Spg7Q3ULF4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Spg7Q3ULF4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spg7Q3ULF4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Spg7Q3ULF4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Spg7Q3ULF4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Spg7Q3ULF4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Spg7Q3ULF4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.74■□□□□ 0.27
Spg7Q3ULF4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Gm13829-201ENSMUST00000119600 138 ntBASIC16.73■□□□□ 0.27
Spg7Q3ULF4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Gm17150-201ENSMUST00000165577 381 ntBASIC16.73■□□□□ 0.27
Spg7Q3ULF4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Gm5035-201ENSMUST00000215581 927 ntBASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg7Q3ULF4 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.72■□□□□ 0.27
Spg7Q3ULF4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Gm27892-201ENSMUST00000185017 106 ntBASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.72■□□□□ 0.27
Spg7Q3ULF4 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Gm5356-201ENSMUST00000093326 615 ntBASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Mir497b-201ENSMUST00000093601 125 ntBASIC16.72■□□□□ 0.27
Spg7Q3ULF4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg7Q3ULF4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Gm29741-201ENSMUST00000192667 421 ntBASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Gm17794-201ENSMUST00000220252 955 ntBASIC16.71■□□□□ 0.27
Spg7Q3ULF4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Spg7Q3ULF4 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms