Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Gm16397-201ENSMUST00000122201 494 ntBASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.86□□□□□ -0.35
Spg11Q3UHA3 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.86□□□□□ -0.35
Spg11Q3UHA3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Spg11Q3UHA3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Gm15131-201ENSMUST00000119124 595 ntBASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Gm19459-201ENSMUST00000176240 835 ntBASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Gm5070-201ENSMUST00000177599 862 ntBASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Gm38144-201ENSMUST00000192790 465 ntBASIC12.85□□□□□ -0.35
Spg11Q3UHA3 AA914427-201ENSMUST00000193194 1166 ntBASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Morn2-202ENSMUST00000227729 656 ntBASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Spg11Q3UHA3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Itm2b-204ENSMUST00000228637 783 ntBASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Spg11Q3UHA3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms