Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Col17a1Q07563 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col17a1Q07563 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col17a1Q07563 Gm4366-201ENSMUST00000201488 1342 ntBASIC21.21■□□□□ 0.99
Col17a1Q07563 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col17a1Q07563 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC21.21■□□□□ 0.99
Col17a1Q07563 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col17a1Q07563 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Col17a1Q07563 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC21.2■□□□□ 0.98
Col17a1Q07563 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC21.2■□□□□ 0.98
Col17a1Q07563 Gm23218-201ENSMUST00000158124 276 ntBASIC21.2■□□□□ 0.98
Col17a1Q07563 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Col17a1Q07563 AC163667.3-201ENSMUST00000225774 222 ntBASIC21.2■□□□□ 0.98
Col17a1Q07563 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Col17a1Q07563 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Gm6771-201ENSMUST00000182716 1001 ntBASIC21.2■□□□□ 0.98
Col17a1Q07563 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col17a1Q07563 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col17a1Q07563 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col17a1Q07563 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.19■□□□□ 0.98
Col17a1Q07563 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col17a1Q07563 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col17a1Q07563 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col17a1Q07563 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col17a1Q07563 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col17a1Q07563 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC21.19■□□□□ 0.98
Col17a1Q07563 Gm12948-201ENSMUST00000119406 682 ntBASIC21.19■□□□□ 0.98
Col17a1Q07563 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC21.19■□□□□ 0.98
Col17a1Q07563 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC21.19■□□□□ 0.98
Col17a1Q07563 Gm23153-201ENSMUST00000175323 313 ntBASIC21.19■□□□□ 0.98
Col17a1Q07563 Gm9358-201ENSMUST00000183067 927 ntBASIC21.19■□□□□ 0.98
Col17a1Q07563 Gm3096-201ENSMUST00000185770 364 ntBASIC21.19■□□□□ 0.98
Col17a1Q07563 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC21.19■□□□□ 0.98
Col17a1Q07563 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Col17a1Q07563 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col17a1Q07563 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Col17a1Q07563 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.18■□□□□ 0.98
Col17a1Q07563 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC21.18■□□□□ 0.98
Col17a1Q07563 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Col17a1Q07563 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 AC126799.1-201ENSMUST00000221976 246 ntBASIC21.18■□□□□ 0.98
Col17a1Q07563 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Col17a1Q07563 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col17a1Q07563 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC21.17■□□□□ 0.98
Col17a1Q07563 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Gm10051-201ENSMUST00000145209 414 ntBASIC21.17■□□□□ 0.98
Col17a1Q07563 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Gm45550-201ENSMUST00000209380 946 ntBASIC21.17■□□□□ 0.98
Col17a1Q07563 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Col17a1Q07563 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col17a1Q07563 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms