Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Thbs3Q05895 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.41□□□□□ -0.42
Thbs3Q05895 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Thbs3Q05895 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.4□□□□□ -0.42
Thbs3Q05895 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Thbs3Q05895 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.4□□□□□ -0.42
Thbs3Q05895 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.4□□□□□ -0.42
Thbs3Q05895 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.4□□□□□ -0.42
Thbs3Q05895 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.4□□□□□ -0.42
Thbs3Q05895 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Thbs3Q05895 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.4□□□□□ -0.42
Thbs3Q05895 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Thbs3Q05895 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Thbs3Q05895 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Thbs3Q05895 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
Thbs3Q05895 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Thbs3Q05895 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Thbs3Q05895 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Thbs3Q05895 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Thbs3Q05895 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
Thbs3Q05895 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Thbs3Q05895 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Thbs3Q05895 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Mir1897-201ENSMUST00000122581 272 ntBASIC12.39□□□□□ -0.43
Thbs3Q05895 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.39□□□□□ -0.43
Thbs3Q05895 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Thbs3Q05895 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Thbs3Q05895 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.39□□□□□ -0.43
Thbs3Q05895 Shd-206ENSMUST00000225145 998 ntBASIC12.39□□□□□ -0.43
Thbs3Q05895 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.39□□□□□ -0.43
Thbs3Q05895 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Thbs3Q05895 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Thbs3Q05895 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Thbs3Q05895 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Thbs3Q05895 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Thbs3Q05895 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.38□□□□□ -0.43
Thbs3Q05895 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.38□□□□□ -0.43
Thbs3Q05895 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Gm6916-202ENSMUST00000205523 195 ntBASIC12.38□□□□□ -0.43
Thbs3Q05895 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Thbs3Q05895 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Thbs3Q05895 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Thbs3Q05895 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms