Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Gm25911-201ENSMUST00000157621 56 ntBASIC14.19□□□□□ -0.14
Pfdn6Q03958 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Gm9824-201ENSMUST00000178707 561 ntBASIC14.19□□□□□ -0.14
Pfdn6Q03958 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.19□□□□□ -0.14
Pfdn6Q03958 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pfdn6Q03958 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Pfdn6Q03958 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Gm25287-201ENSMUST00000103846 110 ntBASIC14.18□□□□□ -0.14
Pfdn6Q03958 Gm22918-201ENSMUST00000103855 110 ntBASIC14.18□□□□□ -0.14
Pfdn6Q03958 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.18□□□□□ -0.14
Pfdn6Q03958 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.18□□□□□ -0.14
Pfdn6Q03958 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn6Q03958 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.17□□□□□ -0.14
Pfdn6Q03958 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Gm11594-201ENSMUST00000122313 162 ntBASIC14.17□□□□□ -0.14
Pfdn6Q03958 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.17□□□□□ -0.14
Pfdn6Q03958 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.17□□□□□ -0.14
Pfdn6Q03958 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn6Q03958 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms