Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Col6a2Q02788 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col6a2Q02788 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Col6a2Q02788 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col6a2Q02788 Gm21470-201ENSMUST00000187680 696 ntBASIC14.07□□□□□ -0.16
Col6a2Q02788 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.07□□□□□ -0.16
Col6a2Q02788 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col6a2Q02788 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col6a2Q02788 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.07□□□□□ -0.16
Col6a2Q02788 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.07□□□□□ -0.16
Col6a2Q02788 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col6a2Q02788 Gm9797-201ENSMUST00000052902 613 ntBASIC14.07□□□□□ -0.16
Col6a2Q02788 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.07□□□□□ -0.16
Col6a2Q02788 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col6a2Q02788 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.07□□□□□ -0.16
Col6a2Q02788 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.07□□□□□ -0.16
Col6a2Q02788 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col6a2Q02788 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a2Q02788 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.06□□□□□ -0.16
Col6a2Q02788 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.06□□□□□ -0.16
Col6a2Q02788 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col6a2Q02788 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.06□□□□□ -0.16
Col6a2Q02788 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col6a2Q02788 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col6a2Q02788 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col6a2Q02788 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.06□□□□□ -0.16
Col6a2Q02788 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.06□□□□□ -0.16
Col6a2Q02788 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.06□□□□□ -0.16
Col6a2Q02788 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.06□□□□□ -0.16
Col6a2Q02788 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.06□□□□□ -0.16
Col6a2Q02788 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.06□□□□□ -0.16
Col6a2Q02788 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.06□□□□□ -0.16
Col6a2Q02788 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.06□□□□□ -0.16
Col6a2Q02788 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.06□□□□□ -0.16
Col6a2Q02788 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Col6a2Q02788 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a2Q02788 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.05□□□□□ -0.16
Col6a2Q02788 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col6a2Q02788 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Gm22189-201ENSMUST00000103822 86 ntBASIC14.05□□□□□ -0.16
Col6a2Q02788 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Col6a2Q02788 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.05□□□□□ -0.16
Col6a2Q02788 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.05□□□□□ -0.16
Col6a2Q02788 Gm28760-201ENSMUST00000185995 736 ntBASIC14.05□□□□□ -0.16
Col6a2Q02788 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.05□□□□□ -0.16
Col6a2Q02788 Gm10766-202ENSMUST00000194123 606 ntBASIC14.05□□□□□ -0.16
Col6a2Q02788 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.05□□□□□ -0.16
Col6a2Q02788 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.05□□□□□ -0.16
Col6a2Q02788 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.05□□□□□ -0.16
Col6a2Q02788 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.05□□□□□ -0.16
Col6a2Q02788 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms