Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ldb1P70662 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ldb1P70662 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.07□□□□□ -0.16
Ldb1P70662 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ldb1P70662 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.07□□□□□ -0.16
Ldb1P70662 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.07□□□□□ -0.16
Ldb1P70662 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.07□□□□□ -0.16
Ldb1P70662 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.07□□□□□ -0.16
Ldb1P70662 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.07□□□□□ -0.16
Ldb1P70662 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ldb1P70662 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.07□□□□□ -0.16
Ldb1P70662 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ldb1P70662 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ldb1P70662 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Ldb1P70662 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ldb1P70662 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ldb1P70662 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.07□□□□□ -0.16
Ldb1P70662 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ldb1P70662 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Ldb1P70662 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Ldb1P70662 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.06□□□□□ -0.16
Ldb1P70662 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.06□□□□□ -0.16
Ldb1P70662 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ldb1P70662 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.06□□□□□ -0.16
Ldb1P70662 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Gm26308-201ENSMUST00000157768 69 ntBASIC14.06□□□□□ -0.16
Ldb1P70662 Gm7774-201ENSMUST00000200064 533 ntBASIC14.06□□□□□ -0.16
Ldb1P70662 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ldb1P70662 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.06□□□□□ -0.16
Ldb1P70662 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb1P70662 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
Ldb1P70662 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ldb1P70662 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Ldb1P70662 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ldb1P70662 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.05□□□□□ -0.16
Ldb1P70662 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.05□□□□□ -0.16
Ldb1P70662 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.05□□□□□ -0.16
Ldb1P70662 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Gm5312-201ENSMUST00000203728 547 ntBASIC14.05□□□□□ -0.16
Ldb1P70662 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ldb1P70662 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
Ldb1P70662 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ldb1P70662 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 BC001981-202ENSMUST00000191393 1545 ntBASIC14.05□□□□□ -0.16
Ldb1P70662 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb1P70662 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms