Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Crnkl1P63154 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.98□□□□□ -0.17
Crnkl1P63154 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.98□□□□□ -0.17
Crnkl1P63154 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.98□□□□□ -0.17
Crnkl1P63154 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Crnkl1P63154 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Crnkl1P63154 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Crnkl1P63154 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Crnkl1P63154 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.98□□□□□ -0.17
Crnkl1P63154 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.97□□□□□ -0.17
Crnkl1P63154 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.97□□□□□ -0.17
Crnkl1P63154 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Crnkl1P63154 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.97□□□□□ -0.17
Crnkl1P63154 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Gm25925-201ENSMUST00000158314 306 ntBASIC13.97□□□□□ -0.17
Crnkl1P63154 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.97□□□□□ -0.17
Crnkl1P63154 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.97□□□□□ -0.17
Crnkl1P63154 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Crnkl1P63154 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Crnkl1P63154 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.97□□□□□ -0.17
Crnkl1P63154 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Crnkl1P63154 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.97□□□□□ -0.17
Crnkl1P63154 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Crnkl1P63154 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Crnkl1P63154 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Crnkl1P63154 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
Crnkl1P63154 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.96□□□□□ -0.17
Crnkl1P63154 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.96□□□□□ -0.17
Crnkl1P63154 Gm12350-201ENSMUST00000121208 462 ntBASIC13.96□□□□□ -0.17
Crnkl1P63154 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.96□□□□□ -0.17
Crnkl1P63154 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.96□□□□□ -0.17
Crnkl1P63154 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.96□□□□□ -0.17
Crnkl1P63154 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.96□□□□□ -0.17
Crnkl1P63154 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Crnkl1P63154 Gm15590-201ENSMUST00000078419 552 ntBASIC13.96□□□□□ -0.17
Crnkl1P63154 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Crnkl1P63154 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Crnkl1P63154 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.96□□□□□ -0.17
Crnkl1P63154 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Crnkl1P63154 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Crnkl1P63154 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Crnkl1P63154 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Crnkl1P63154 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Crnkl1P63154 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Crnkl1P63154 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Crnkl1P63154 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Crnkl1P63154 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Crnkl1P63154 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Crnkl1P63154 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Crnkl1P63154 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.95□□□□□ -0.18
Crnkl1P63154 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.95□□□□□ -0.18
Crnkl1P63154 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms