Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm16198-201ENSMUST00000118766 670 ntBASIC12.46□□□□□ -0.41
Sec61a1P61620 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a1P61620 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a1P61620 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a1P61620 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a1P61620 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a1P61620 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a1P61620 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a1P61620 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a1P61620 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a1P61620 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.46□□□□□ -0.42
Sec61a1P61620 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a1P61620 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a1P61620 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a1P61620 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a1P61620 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a1P61620 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sec61a1P61620 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.45□□□□□ -0.42
Sec61a1P61620 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Sec61a1P61620 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sec61a1P61620 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sec61a1P61620 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.45□□□□□ -0.42
Sec61a1P61620 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sec61a1P61620 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.45□□□□□ -0.42
Sec61a1P61620 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Gm9385-201ENSMUST00000117563 472 ntBASIC12.45□□□□□ -0.42
Sec61a1P61620 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.45□□□□□ -0.42
Sec61a1P61620 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.45□□□□□ -0.42
Sec61a1P61620 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Gm27301-201ENSMUST00000184012 127 ntBASIC12.45□□□□□ -0.42
Sec61a1P61620 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.45□□□□□ -0.42
Sec61a1P61620 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Chchd1-203ENSMUST00000224633 557 ntBASIC12.45□□□□□ -0.42
Sec61a1P61620 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.45□□□□□ -0.42
Sec61a1P61620 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.45□□□□□ -0.42
Sec61a1P61620 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sec61a1P61620 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sec61a1P61620 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.44□□□□□ -0.42
Sec61a1P61620 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Gm26308-201ENSMUST00000157768 69 ntBASIC12.44□□□□□ -0.42
Sec61a1P61620 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sec61a1P61620 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.44□□□□□ -0.42
Sec61a1P61620 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.44□□□□□ -0.42
Sec61a1P61620 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sec61a1P61620 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sec61a1P61620 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sec61a1P61620 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.43□□□□□ -0.42
Sec61a1P61620 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms