Protein–RNA interactions for Protein: P61080

Ube2d1, Ubiquitin-conjugating enzyme E2 D1, mousemouse

Known RBP Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d1P61080 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Ube2d1P61080 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ube2d1P61080 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ube2d1P61080 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC9.93□□□□□ -0.82
Ube2d1P61080 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Gm6944-201ENSMUST00000182449 1006 ntBASIC9.93□□□□□ -0.82
Ube2d1P61080 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Ube2d1P61080 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC9.93□□□□□ -0.82
Ube2d1P61080 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC9.93□□□□□ -0.82
Ube2d1P61080 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ube2d1P61080 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC9.93□□□□□ -0.82
Ube2d1P61080 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ube2d1P61080 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC9.93□□□□□ -0.82
Ube2d1P61080 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.93□□□□□ -0.82
Ube2d1P61080 AC025913.2-201ENSMUST00000220136 1766 ntBASIC9.93□□□□□ -0.82
Ube2d1P61080 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC9.93□□□□□ -0.82
Ube2d1P61080 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC9.93□□□□□ -0.82
Ube2d1P61080 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Gm9252-201ENSMUST00000172364 1602 ntBASIC9.93□□□□□ -0.82
Ube2d1P61080 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ube2d1P61080 Gm8096-201ENSMUST00000209921 1591 ntBASIC9.92□□□□□ -0.82
Ube2d1P61080 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Gm37105-201ENSMUST00000192251 2085 ntBASIC9.92□□□□□ -0.82
Ube2d1P61080 Gm27196-201ENSMUST00000184787 2582 ntBASIC9.92□□□□□ -0.82
Ube2d1P61080 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.92□□□□□ -0.82
Ube2d1P61080 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC9.92□□□□□ -0.82
Ube2d1P61080 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ube2d1P61080 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Best4-ps-201ENSMUST00000129783 1380 ntBASIC9.92□□□□□ -0.82
Ube2d1P61080 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ube2d1P61080 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.92□□□□□ -0.82
Ube2d1P61080 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Gm7222-201ENSMUST00000117512 906 ntBASIC9.92□□□□□ -0.82
Ube2d1P61080 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC9.92□□□□□ -0.82
Ube2d1P61080 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC9.92□□□□□ -0.82
Ube2d1P61080 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC9.92□□□□□ -0.82
Ube2d1P61080 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.92□□□□□ -0.82
Ube2d1P61080 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Tcf21-202ENSMUST00000218002 1788 ntBASIC9.92□□□□□ -0.82
Ube2d1P61080 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Ube2d1P61080 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ube2d1P61080 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ube2d1P61080 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ube2d1P61080 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Ube2d1P61080 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ube2d1P61080 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ube2d1P61080 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms