Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nup43P59235 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.33□□□□□ -0.27
Nup43P59235 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Nup43P59235 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nup43P59235 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.33□□□□□ -0.28
Nup43P59235 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Nup43P59235 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.33□□□□□ -0.28
Nup43P59235 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.33□□□□□ -0.28
Nup43P59235 Gm8584-201ENSMUST00000171982 758 ntBASIC13.33□□□□□ -0.28
Nup43P59235 Gm27680-201ENSMUST00000184192 160 ntBASIC13.33□□□□□ -0.28
Nup43P59235 Gm9229-201ENSMUST00000222777 126 ntBASIC13.33□□□□□ -0.28
Nup43P59235 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.33□□□□□ -0.28
Nup43P59235 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup43P59235 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.32□□□□□ -0.28
Nup43P59235 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Nup43P59235 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nup43P59235 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nup43P59235 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nup43P59235 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nup43P59235 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nup43P59235 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.32□□□□□ -0.28
Nup43P59235 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.32□□□□□ -0.28
Nup43P59235 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Gm33320-201ENSMUST00000192232 530 ntBASIC13.32□□□□□ -0.28
Nup43P59235 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.32□□□□□ -0.28
Nup43P59235 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nup43P59235 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.32□□□□□ -0.28
Nup43P59235 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.32□□□□□ -0.28
Nup43P59235 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Nup43P59235 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup43P59235 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Nup43P59235 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.31□□□□□ -0.28
Nup43P59235 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.31□□□□□ -0.28
Nup43P59235 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.31□□□□□ -0.28
Nup43P59235 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.31□□□□□ -0.28
Nup43P59235 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.31□□□□□ -0.28
Nup43P59235 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nup43P59235 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nup43P59235 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nup43P59235 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nup43P59235 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Nup43P59235 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup43P59235 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms