Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33bP59016 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33bP59016 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Vps33bP59016 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.58■□□□□ 0.4
Vps33bP59016 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33bP59016 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33bP59016 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33bP59016 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vps33bP59016 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC17.57■□□□□ 0.4
Vps33bP59016 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Gm37489-201ENSMUST00000191883 159 ntBASIC17.57■□□□□ 0.4
Vps33bP59016 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.57■□□□□ 0.4
Vps33bP59016 Nsd1-205ENSMUST00000224693 852 ntBASIC17.57■□□□□ 0.4
Vps33bP59016 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.57■□□□□ 0.4
Vps33bP59016 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33bP59016 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.57■□□□□ 0.4
Vps33bP59016 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.57■□□□□ 0.4
Vps33bP59016 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
Vps33bP59016 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Carlr-201ENSMUST00000181515 2574 ntBASIC17.56■□□□□ 0.4
Vps33bP59016 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vps33bP59016 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.56■□□□□ 0.4
Vps33bP59016 Gm6023-201ENSMUST00000118217 606 ntBASIC17.56■□□□□ 0.4
Vps33bP59016 Gm13123-201ENSMUST00000122173 492 ntBASIC17.56■□□□□ 0.4
Vps33bP59016 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.56■□□□□ 0.4
Vps33bP59016 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps33bP59016 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vps33bP59016 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33bP59016 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vps33bP59016 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vps33bP59016 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vps33bP59016 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.55■□□□□ 0.4
Vps33bP59016 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vps33bP59016 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.55■□□□□ 0.4
Vps33bP59016 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.55■□□□□ 0.4
Vps33bP59016 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps33bP59016 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps33bP59016 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vps33bP59016 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33bP59016 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33bP59016 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33bP59016 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33bP59016 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33bP59016 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.54■□□□□ 0.4
Vps33bP59016 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33bP59016 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33bP59016 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33bP59016 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33bP59016 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33bP59016 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33bP59016 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms