Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Gm25287-201ENSMUST00000103846 110 ntBASIC14.42□□□□□ -0.1
Tubgcp3P58854 Gm22918-201ENSMUST00000103855 110 ntBASIC14.42□□□□□ -0.1
Tubgcp3P58854 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.42□□□□□ -0.1
Tubgcp3P58854 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Gm18049-201ENSMUST00000208909 581 ntBASIC14.42□□□□□ -0.1
Tubgcp3P58854 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubgcp3P58854 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Tubgcp3P58854 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tubgcp3P58854 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tubgcp3P58854 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubgcp3P58854 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.41□□□□□ -0.1
Tubgcp3P58854 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.41□□□□□ -0.1
Tubgcp3P58854 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.41□□□□□ -0.1
Tubgcp3P58854 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.4□□□□□ -0.1
Tubgcp3P58854 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.4□□□□□ -0.1
Tubgcp3P58854 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Gm9824-201ENSMUST00000178707 561 ntBASIC14.4□□□□□ -0.1
Tubgcp3P58854 Gm2756-201ENSMUST00000195851 400 ntBASIC14.4□□□□□ -0.1
Tubgcp3P58854 Gm43474-201ENSMUST00000196415 774 ntBASIC14.4□□□□□ -0.1
Tubgcp3P58854 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.4□□□□□ -0.1
Tubgcp3P58854 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubgcp3P58854 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms