Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.42□□□□□ -0.58
Sssca1P56873 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.42□□□□□ -0.58
Sssca1P56873 Gm45747-201ENSMUST00000212203 999 ntBASIC11.42□□□□□ -0.58
Sssca1P56873 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Gm15590-201ENSMUST00000078419 552 ntBASIC11.42□□□□□ -0.58
Sssca1P56873 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.42□□□□□ -0.58
Sssca1P56873 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.42□□□□□ -0.58
Sssca1P56873 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sssca1P56873 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.41□□□□□ -0.58
Sssca1P56873 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sssca1P56873 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sssca1P56873 Gm16198-201ENSMUST00000118766 670 ntBASIC11.41□□□□□ -0.58
Sssca1P56873 Mir8098-201ENSMUST00000184011 137 ntBASIC11.41□□□□□ -0.58
Sssca1P56873 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.41□□□□□ -0.58
Sssca1P56873 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sssca1P56873 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.41□□□□□ -0.58
Sssca1P56873 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sssca1P56873 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sssca1P56873 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sssca1P56873 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.4□□□□□ -0.58
Sssca1P56873 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sssca1P56873 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Sssca1P56873 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.4□□□□□ -0.58
Sssca1P56873 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Sssca1P56873 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.4□□□□□ -0.58
Sssca1P56873 Gm5479-201ENSMUST00000160578 435 ntBASIC11.4□□□□□ -0.58
Sssca1P56873 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.4□□□□□ -0.58
Sssca1P56873 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.4□□□□□ -0.58
Sssca1P56873 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.4□□□□□ -0.58
Sssca1P56873 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sssca1P56873 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.4□□□□□ -0.58
Sssca1P56873 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sssca1P56873 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sssca1P56873 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sssca1P56873 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sssca1P56873 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sssca1P56873 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sssca1P56873 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sssca1P56873 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sssca1P56873 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms