Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SmoP56726 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SmoP56726 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
SmoP56726 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SmoP56726 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SmoP56726 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SmoP56726 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.17□□□□□ -0.14
SmoP56726 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SmoP56726 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SmoP56726 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SmoP56726 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SmoP56726 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SmoP56726 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SmoP56726 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SmoP56726 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.16□□□□□ -0.14
SmoP56726 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SmoP56726 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SmoP56726 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SmoP56726 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SmoP56726 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.16□□□□□ -0.14
SmoP56726 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SmoP56726 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
SmoP56726 Gm12859-201ENSMUST00000117834 427 ntBASIC14.16□□□□□ -0.14
SmoP56726 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.16□□□□□ -0.14
SmoP56726 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.16□□□□□ -0.14
SmoP56726 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.16□□□□□ -0.14
SmoP56726 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.16□□□□□ -0.14
SmoP56726 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.16□□□□□ -0.14
SmoP56726 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SmoP56726 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SmoP56726 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SmoP56726 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.15□□□□□ -0.14
SmoP56726 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SmoP56726 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SmoP56726 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SmoP56726 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SmoP56726 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Gm8584-201ENSMUST00000171982 758 ntBASIC14.15□□□□□ -0.14
SmoP56726 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.15□□□□□ -0.14
SmoP56726 Gm5425-201ENSMUST00000214125 459 ntBASIC14.15□□□□□ -0.14
SmoP56726 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SmoP56726 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SmoP56726 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.15□□□□□ -0.14
SmoP56726 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.15□□□□□ -0.14
SmoP56726 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SmoP56726 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SmoP56726 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
SmoP56726 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.15
SmoP56726 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SmoP56726 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.14□□□□□ -0.15
SmoP56726 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SmoP56726 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SmoP56726 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SmoP56726 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
SmoP56726 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SmoP56726 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SmoP56726 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SmoP56726 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SmoP56726 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.14□□□□□ -0.15
SmoP56726 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SmoP56726 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SmoP56726 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.14□□□□□ -0.15
SmoP56726 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms